segName='   A'
seq="""
MET LEU ALA LYS LEU CYS LYS THR ILE TYR 
PRO LEU ALA ASP LEU LEU ALA ARG PRO LEU 
PRO GLU GLY VAL ASP PRO LEU LYS LEU GLU 
ILE TYR LEU THR ASP GLU ASP PHE GLU PHE 
ALA LEU ASP MET THR ARG ASP GLU TYR ASN 
ALA LEU PRO ALA TRP LYS GLN VAL ASN LEU 
LYS LYS ALA LYS GLY LEU PHE
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
