segName='   A'
seq="""
MET SER GLY GLY GLY VAL PHE THR ASP ILE 
LEU ALA ALA ALA GLY ARG ILE PHE GLU VAL 
MET VAL GLU GLY HIS TRP GLU THR VAL GLY 
MET LEU PHE ASP SER LEU GLY LYS GLY THR 
MET ARG ILE ASN ARG ASN ALA TYR GLY SER 
MET GLY GLY GLY SER LEU ARG GLY SER
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
