segName='   A'
seq="""
GLY SER ASP PRO GLY GLN GLY GLY GLY THR 
HIS SER GLN TRP ASN LYS PRO SER LYS PRO 
LYS THR ASN MET LYS HIS MET ALA GLY ALA 
ALA ALA ALA GLY ALA VAL VAL GLY GLY LEU 
GLY GLY TYR VAL LEU GLY SER ALA MET SER 
ARG PRO ILE ILE HIS PHE GLY SER ASP TYR 
GLU ASP ARG TYR TYR ARG GLU ASN MET HIS 
ARG TYR PRO ASN GLN VAL TYR TYR ARG PRO 
MET ASP GLU TYR SER ASN GLN ASN ASN PHE 
VAL HIS ASN CYS VAL ASN ILE THR ILE LYS 
GLN HIS THR VAL THR THR THR THR LYS GLY 
GLU ASN PHE THR GLU THR ASP VAL LYS MET 
MET GLU ARG VAL VAL GLU GLN MET CYS ILE 
THR GLN TYR GLU ARG GLU SER GLN ALA TYR 
TYR GLN ARG GLY SER SER
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
