segName='   A'
seq="""
GLY MET LYS PRO VAL SER LEU SER TYR ARG 
CYS PRO CYS ARG PHE PHE GLU SER HIS VAL 
ALA ARG ALA ASN VAL LYS HIS LEU LYS ILE 
LEU ASN THR PRO ASN CYS ALA CYS GLN ILE 
VAL ALA ARG LEU LYS ASN ASN ASN ARG GLN 
VAL CYS ILE ASP PRO LYS LEU LYS TRP ILE 
GLN GLU TYR LEU GLU LYS CYS LEU ASN LYS 
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
