segName='   B'
seq="""
PHE VAL ASN GLN HIS LEU CYS GLY SER HIS 
LEU VAL GLU ALA LEU TYR LEU VAL CYS GLY 
GLU ARG GLY PHE PHE TYR THR PRO LYS THR 
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
