segName='   A'
seq="""
MET ALA THR ALA ASP ASP PHE LYS LEU ILE 
ARG ASP ILE HIS SER THR GLY GLY ARG ARG 
GLN VAL PHE GLY SER ARG GLU GLN LYS PRO 
PHE GLU ASP LEU VAL ASP LEU GLY TRP LEU 
LYS ARG SER SER VAL ASP SER ARG ALA THR 
HIS TYR GLN ILE THR GLU ARG GLY THR SER 
ALA ALA LEU ARG SER
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
