segName='   A'
seq="""
ARG GLY SER HIS HIS HIS HIS HIS HIS GLY 
SER ALA VAL GLN VAL THR PHE THR VAL GLN 
LYS GLY SER ASP PRO LYS LYS LEU VAL LEU 
ASP ILE LYS TYR THR ARG PRO GLY ASP SER 
LEU ALA GLU VAL GLU LEU ARG GLN HIS GLY 
SER GLU GLU TRP GLU PRO LEU THR LYS LYS 
GLY ASN VAL TRP GLU VAL LYS SER SER LYS 
PRO LEU VAL GLY PRO PHE ASN PHE ARG PHE 
MET SER LYS GLY GLY MET ARG ASN VAL PHE 
ASP GLU VAL ILE PRO THR ALA PHE SER ILE 
GLY LYS THR TYR LYS PRO GLU GLU
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
