segName='   A'
seq="""
MET SER SER ASP TYR VAL MET ALA THR LYS 
ASP GLY ARG MET ILE LEU THR ASP GLY LYS 
PRO GLU ILE ASP ASP ASP THR GLY LEU VAL 
SER TYR HIS ASP GLN GLN GLY ASN ALA MET 
GLN ILE ASN ARG ASP ASP VAL SER GLN ILE 
ILE GLU ARG LEU GLU HIS HIS HIS HIS HIS 
HIS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
