segName='   A'
seq="""
GLY GLY GLY GLN CYS TYR PHE ILE PRO ASN 
GLN SER LEU LYS PRO ASN GLU CYS GLN ASP 
LEU LYS GLY VAL SER HIS PRO LEU ASN SER 
VAL TRP LYS THR LYS ASP CYS GLU GLU CYS 
THR CYS GLY GLN ASP ALA ILE SER CYS CYS 
ASN THR ALA ALA ILE PRO THR GLY TYR ASP 
THR ASN LYS CYS GLN LYS ILE LEU ASN LYS 
LYS THR CYS THR TYR THR VAL VAL GLU LYS 
LYS ASP PRO GLY LYS THR CYS ASP VAL THR 
GLY TRP VAL LEU
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
