segName='   A'
seq="""
MET ASP GLU PRO LEU SER ILE LEU VAL ARG 
ASN ASN LYS GLY ARG SER SER THR TYR GLU 
VAL ARG LEU THR GLN THR VAL ALA HIS LEU 
LYS GLN GLN VAL SER GLY LEU GLU GLY VAL 
GLN ASP ASP LEU PHE TRP LEU THR PHE GLU 
GLY LYS PRO LEU GLU ASP GLN LEU PRO LEU 
GLY GLU TYR GLY LEU LYS PRO LEU SER THR 
VAL PHE MET ASN LEU ARG LEU ARG GLY GLY 
LEU GLU HIS HIS HIS HIS HIS HIS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
