segName='   A'
seq="""
G G G C C A U A C C 
U C U U G G G C C U 
G G U U A G U A C C 
U C U U C G G U G G 
G A A U A C C A G G 
U G C C C
"""
patch_list=[]
seqType='rna'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
