segName='   A'
seq="""
GLY SER SER GLY SER SER GLY LYS LYS ARG 
LYS GLY ASN LEU PRO ALA GLU SER VAL LYS 
ILE LEU ARG ASP TRP MET TYR LYS HIS ARG 
PHE LYS ALA TYR PRO SER GLU GLU GLU LYS 
GLN MET LEU SER GLU LYS THR ASN LEU SER 
LEU LEU GLN ILE SER ASN TRP PHE ILE ASN 
ALA ARG ARG ARG ILE LEU PRO ASP MET LEU 
GLN GLN ARG ARG ASN ASP PRO SER GLY PRO 
SER SER GLY
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
