segName='   A'
seq="""
GLY SER SER GLY SER SER GLY THR THR ALA 
LYS PRO GLN GLN ILE GLN ALA LEU MET ASP 
GLU VAL THR LYS GLN GLY ASN ILE VAL ARG 
GLU LEU LYS ALA GLN LYS ALA ASP LYS ASN 
GLU VAL ALA ALA GLU VAL ALA LYS LEU LEU 
ASP LEU LYS LYS GLN LEU ALA VAL ALA GLU 
GLY LYS PRO PRO GLU ALA PRO LYS GLY LYS 
LYS LYS LYS SER GLY PRO SER SER GLY
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
