segName='   A'
seq="""
LYS ASP ARG PRO SER LEU CYS ASP LEU PRO 
ALA ASP SER GLY SER GLY THR LYS ALA GLU 
LYS ARG ILE TYR TYR ASN SER ALA ARG LYS 
GLN CYS LEU ARG PHE ASP TYR THR GLY GLN 
GLY GLY ASN GLU ASN ASN PHE ARG ARG THR 
TYR ASP CYS GLN ARG THR CYS LEU TYR THR 
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
