segName='   B'
seq="""
PRO THR THR VAL GLU GLY ARG ASN ASP GLU 
LYS ALA LEU LEU GLU GLN LEU VAL SER PHE 
LEU SER GLY LYS ASP GLU THR GLU LEU ALA 
GLU LEU ASP ARG ALA LEU GLY ILE ASP LYS 
LEU VAL GLN GLY GLY GLY LEU ASP VAL LEU 
SER LYS LEU VAL PRO ARG GLY SER LEU
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
