segName='   A'
seq="""
PRO ASN ARG SER ILE SER PRO SER ALA LEU 
GLN ASP LEU LEU ARG THR LEU LYS SER PRO 
SER SER PRO GLN GLN GLN GLN GLN VAL LEU 
ASN ILE LEU LYS SER ASN PRO GLN LEU MET 
ALA ALA PHE ILE LYS GLN ARG THR ALA LYS 
TYR VAL ALA ASN GLN PRO GLY MET GLN
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
