segName='   A'
seq="""
MET LYS ASN ARG LEU GLY THR TRP TRP VAL 
ALA ILE LEU CYS MET LEU LEU ALA SER HIS 
LEU SER THR VAL LYS ALA ARG GLY ILE LYS 
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
