segName='   A'
seq="""
GLY SER MET ASN ALA PRO ALA ARG ALA ALA 
ALA LYS THR ALA ALA ASP ALA LEU ALA ALA 
ALA LYS LYS THR ALA ALA ASP ALA ALA ALA 
ALA ALA ALA ALA ALA
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
