segName='   A'
seq="""
GLU ASN ARG GLU VAL PRO PRO GLY PHE THR 
ALA LEU ILE LYS THR LEU ARG LYS CYS LYS 
ILE ILE
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
