segName='   A'
seq="""
GLY SER SER GLY SER SER GLY SER HIS GLN 
LEU ILE VAL LYS ALA ARG PHE ASN PHE LYS 
GLN THR ASN GLU ASP GLU LEU SER VAL CYS 
LYS GLY ASP ILE ILE TYR VAL THR ARG VAL 
GLU GLU GLY GLY TRP TRP GLU GLY THR LEU 
ASN GLY ARG THR GLY TRP PHE PRO SER ASN 
TYR VAL ARG GLU ILE LYS SER SER GLU ARG 
SER GLY PRO SER SER GLY
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
