segName='   A'
seq="""
ASN HIS ILE SER THR SER ASP GLN GLU LYS 
LEU VAL GLN PRO THR PRO LEU LEU LEU SER 
LEU LEU LYS SER ALA GLY ALA GLN LYS GLU 
THR PHE THR MET LYS GLU VAL LEU TYR HIS 
LEU GLY GLN TYR ILE MET ALA LYS GLN LEU 
TYR ASP GLU LYS GLN GLN HIS ILE VAL HIS 
CYS SER ASN ASP PRO LEU GLY GLU LEU PHE 
GLY VAL GLN GLU PHE SER VAL LYS GLU HIS 
ARG ARG ILE TYR ALA MET ILE SER ARG ASN 
LEU VAL SER ALA ASN VAL LYS GLU SER SER 
GLU ASP ILE PHE GLY ASN VAL
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
