segName='   A'
seq="""
GLU ALA GLU PHE VAL ARG ILE CYS SER LYS 
SER TYR LEU THR LEU GLU ASN GLY LYS VAL 
PHE LEU THR GLY GLY ASP LEU PRO ALA LEU 
ASP GLY ALA ARG VAL GLU PHE ARG CYS ASP 
PRO ASP PHE HIS LEU VAL GLY SER SER ARG 
SER VAL CYS SER GLN GLY GLN TRP SER THR 
PRO LYS PRO HIS CYS GLN VAL ASN
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
