segName='   A'
seq="""
GLY SER SER GLY LYS ARG PRO PHE VAL CYS 
ARG ILE CYS LEU SER ALA PHE THR THR LYS 
ALA ASN CYS ALA ARG HIS LEU LYS VAL HIS 
THR ASP THR LEU SER
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
