segName='   A'
seq="""
MET LEU MET GLY GLU ARG ILE ARG ALA ARG 
ARG ILE GLN LEU GLY LEU ASN GLN ALA GLU 
LEU ALA GLN LYS VAL GLY VAL ASP GLN GLN 
ALA ILE GLU GLN LEU GLU ASN GLY LYS ALA 
LYS ARG PRO ARG PHE LEU PRO GLU LEU ALA 
ARG ALA LEU GLY VAL ALA VAL ASP TRP LEU 
LEU ASN GLY ALA
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
