segName='   B'
seq="""
ARG MET SER ALA ASP ALA MET LEU ARG ALA 
LEU LEU GLY SER LYS HIS LYS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
