segName='   A'
seq="""
ALA SER MET THR ASP GLN GLN ALA GLU ALA 
ARG ALA PHE LEU SER GLU GLU MET ILE ALA 
GLU PHE LYS ALA ALA PHE ASP MET PHE ASP 
ALA ASP GLY GLY GLY ASP ILE SER THR LYS 
GLU LEU GLY THR VAL MET ARG MET LEU GLY 
GLN ASN PRO THR LYS CYS GLU LEU ASP ALA 
ILE ILE CYS GLU VAL ASP GLU ASP GLY SER 
GLY THR ILE ASP PHE GLU GLU PHE LEU VAL 
MET MET VAL ARG GLN MET LYS GLU ASP ALA 
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
