segName='   A'
seq="""
THR ASP VAL THR ILE LYS THR LEU ALA ALA 
GLU ARG GLN THR SER VAL GLU ARG LEU VAL 
GLN GLN PHE ALA ASP ALA GLY ILE ARG LYS 
SER ALA ASP ASP SER VAL SER ALA GLN GLU 
LYS GLN THR LEU ILE ASP HIS LEU ASN
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
