segName='   A'
seq="""
VAL ASP ALA GLU ALA VAL VAL GLN GLN LYS 
CYS ILE SER CYS HIS GLY GLY ASP LEU THR 
GLY ALA SER ALA PRO ALA ILE ASP LYS ALA 
GLY ALA ASN TYR SER GLU GLU GLU ILE LEU 
ASP ILE ILE LEU ASN GLY GLN GLY GLY MET 
PRO GLY GLY ILE ALA LYS GLY ALA GLU ALA 
GLU ALA VAL ALA ALA TRP LEU ALA GLU LYS 
LYS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
