segName='   B'
seq="""
GLY CYS GLY LYS SER ILE ASP ASP LEU GLU 
ASP GLU LEU TYR ALA GLN LYS LEU LYS TYR 
LYS ALA ILE SER GLU GLU LEU ASP HIS ALA 
LEU LYS ASP MET THR SER ILE
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
