segName='   A'
seq="""
LYS ASN ARG PRO THR PHE CYS ASN LEU LEU 
PRO GLU THR GLY ARG CYS ASN ALA LEU ILE 
PRO ALA PHE TYR TYR ASN SER HIS LEU HIS 
LYS CYS GLN LYS PHE ASN TYR GLY GLY CYS 
GLY GLY ASN ALA ASN ASN PHE LYS THR ILE 
ASP GLU CYS GLN ARG THR CYS ALA ALA LYS 
TYR GLY ARG SER SER
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
