segName='   A'
seq="""
MET TYR ILE ILE PHE ARG CYS ASP CYS GLY 
ARG ALA LEU TYR SER ARG GLU GLY ALA LYS 
THR ARG LYS CYS VAL CYS GLY ARG THR VAL 
ASN VAL LYS ASP ARG ARG ILE PHE GLY ARG 
ALA ASP ASP PHE GLU GLU ALA SER GLU LEU 
VAL ARG LYS LEU GLN GLU GLU LYS TYR GLY 
SER CYS HIS PHE THR ASN PRO SER LYS ARG 
GLU
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
