segName='   A'
seq="""
ASN ILE SER GLN HIS GLN CYS VAL LYS LYS 
GLN CYS PRO GLN ASN SER GLY CYS PHE ARG 
HIS LEU ASP GLU ARG GLU GLU CYS LYS CYS 
LEU LEU ASN TYR LYS GLN GLU GLY ASP LYS 
CYS VAL GLU ASN PRO ASN PRO THR CYS ASN 
GLU ASN ASN GLY GLY CYS ASP ALA ASP ALA 
LYS CYS THR GLU GLU ASP SER GLY SER ASN 
GLY LYS LYS ILE THR CYS GLU CYS THR LYS 
PRO ASP SER TYR PRO LEU PHE ASP GLY ILE 
PHE CYS SER SER SER ASN
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
